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--- people:miguel_guevara [2018/02/02 15:09]
aphaxel [Miguel Eduardo Guevara]
+++ people:miguel_guevara [2023/02/11 22:31] (current)
pmoreno
@@ Line 1: / Line 1: @@
 ====== Miguel Eduardo Guevara ======
-Ph.D Student, Engineer Focused on Computer Science, Universidad del Valle
+Ph.D, Biologist Focused on Computer Sciences, Universidad del Valle
-|{{:people:MiguelGuevara.jpg?nolink}}|Bioinformatics and Biocomputation Research Group \\ School of Computer Science [[http://eisc.univalle.edu.co|EISC]] \\ Universidad del Valle,  Cali-Colombia\\ {{:people:miguel-guevara-email.png?nolink}}\\ http://bioinformatica.univalle.edu.co \\ {{:curriculum-LuisGarreta2011.pdf |CV/Resume: pdf }} |
+|{{:people:captura_de_pantalla_2021-01-28_a_la_s_4.16.45_p._m..png?200 |}}|Bioinformatics and Biocomputation Research Group \\ School of Computer Science [[http://eisc.univalle.edu.co|EISC]] \\ Universidad del Valle,  Cali-Colombia\\ {{:people:miguel-guevara-email.png?nolink}}\\ http://bioinformatica.univalle.edu.co \\ {{:curriculum-Miguel.pdf |CV/Resume: pdf }} |
 For more information see: \\
@@ Line 10: / Line 10: @@
 ====== Research Interests ======
-  * Bioinformatics & Computational Biology, Machine Learning, Distributed Computing.
+  * Bioinformatics & Computational Biology, High Performace Computing, Distributed Computing, Architect HPC
 ====== Education ======
-  * **Ph.D. Candidate in Engineering emphasis in Computer Science**, Universidad del Valle, Cali-Colombia, expected graduation 2012. \\ Thesis: "A computing framework to analyze initial and derived intermediate conformations of a globular protein" \\ Advisor: Professor Irene Tischer
+  * **Ph.D. in Engineering emphasis in Computer Science and Bioinformatics**, Universidad del Valle, Cali-Colombia, expected graduation 2018. \\ Thesis: "Development of a distributed Framework of Bioinformatics analysis for searching for significant genetic variants associated with breast cancer" \\ Advisor: Pedro Moreno, PhD
-  * **M.S. in Engineering, emphasis in Computer Science (2006)**, Universidad del Valle, Cali-Colombia \\ Thesis: “Bayesian Models of Mixture of Experts for Eukaryotic Gene prediction" \\ Advisor: Professor Irene Tischer
+  * **B.S. in Biology (2009)**, Universidad del Cauca, Popayán-Colombia \\ Thesis: “Development of a new model of synthetic peptide candidate for HIV vaccine, using bioinformatics tools and molecular dynamics simulation." \\ Advisor: Patricia Eugenia Velez, PhD.
-  * **B.S. in Computer Science (2001)**, Pontificia Universidad Javeriana, Cali-Colombia \\ Thesis: “Object-oriented architecture for modeling magic lens filters as display elements within graphical user interfaces" (Laureate Thesis Award) \\ Advisor: Professor Andrés A. Navarro
-  * **A.S. in Electronics Technology (2001),** Universidad del Valle, Cali-Colombia \\ Thesis: "Code Generation in Z-80 assembler from a low C language compiler“ \\ Advisor: Professor William Giraldo
-====== Honours & Awards =====
-  * **Santander Entrepreneurship Award, Science and Innovation - Colombia (2008).** M. Almanza, P. Vélez, N. Díaz, L. Garreta, C. Téllez, E. Caldón and P. Moreno. Exon Prediction Model that integrates fractal characteristics of DNA in a data mining machine learning technique as potential biotechnological use service
-  * **COLCIENCIAS Scholarship: Enhancement of Colombian Scientific Community through National Doctorate Programs (2007)**. Doctoral Scholarship
-  * **Best undergraduate project in Systems Engineering at the Valle del Cauca (2002).**  Asociación de Ingenieros del Valle.
-  * **Honour distinction for excellence in graduation work (2001).** Laureate Thesis Award. Highest honour awarded for outstanding research work. B.S. in Computer Science. Pontificia Universidad Javeriana, Cali-Colombia
-====== Academic Experience ======
-  * **Research Assistant 2007 – Present.** School of Computer Science, Universidad del Valle, Cali-Colombia.\\ Working on the development of models and algorithms for gene analysis, prediction and gene or genome comparison based on informatics methodologies. \\ Recent developments: Graphic interfaces for gene prediction, able to make training and prediction easier for the end user. User directed feedback which allows to control and improve the training process. Comparison of different gene predictions and their optimization by Bayesian mixtures.
-  * **Researcher and Lecturer, 2002-2006.** \\ System Department, University of Cauca, Popayán-Colombia \\ Research projects: Multifractal analysis of diverse genomes (2004-2006) \\ Courses taught (Undergrad): Structures of Programming Languages (2004-2006), Object-Oriented Programming (2002-2003), Data Structures (2002-2003), Introduction to Programing (2005-2006)
-====== Publications ======
-  * [2011] Pedro A. Moreno, Patricia E. Vélez, Ember Martínez, Luis Garreta, Néstor Díaz, Siler Amador, José M. Gutiérrez, Irene Tischer, Ashwin K. Naik, Fabián Tobar, Felipe García (Oct, 2011). **The human genome: a multifractal analysis**. BMC Genomics 12:506. DOI:  10.1186/1471-2164-12-506. URL: http://www.ncbi.nlm.nih.gov/pubmed/21999602
-  * [2011] Garreta, L. and Tischer, I. (May, 2011). **Evaluation of structural and energetic protein properties on the villin folding simulation**. Computing Congress (CCC), 2011 6th Colombian, vol., no., pp.1-6, 4-6 May 2011. DOI: 10.1109/COLOMCC.2011.5936303. URL: http://ieeexplore.ieee.org/stamp/stamp.jsp?tp=&arnumber=5936303&isnumber=5936275
-  * [2010] Patricia E. Vélez, Luis Garreta, Ember Martínez, Néstor Díaz, Siler Amador, José M. Gutiérrez, and Irene Tischer, Pedro A. Moreno. (May, 2010). **The Caenorhabditis elegans genome: a multifractal analysis**. Genet and Mol Res 9:949-965. DOI:  10.1186/1471-2164-12-506. URL: http://www.ncbi.nlm.nih.gov/pubmed/20506082
-  * [2010] Siler Amador, Oscar Caicedo, Luis Garreta and Dougglas Carmona (Jan, 2010). **Probabilistic analysis using the Bayes theorem to predict the tendency to create user passwords**. Revista Generación Digital 9:77-81. ISSN: 1909-9223. URL: http://sanmartinbaq.edu.co/revistas/index.php/gd/article/view/31/pdf
-  * [2008] Sandra Roa and Luis Garreta (2008). **Transparent API**. Avances En Sistemas E Informática 5:155-158. ISSN: 1657-7663. URL: http://www.revistas.unal.edu.co/index.php/avances/article/view/10036
-====== Conferences =====
-  * [2011] Garreta, L. and Tischer, I. **Evaluation of structural and energetic protein properties on the villin folding simulation**. Sexto Congreso Colombiano de Computación (6CCC). Manizales, Colombia, Mayo 2011. DOI: 10.1186/1471-2164-12-506.
-  * [2010] Garreta, L. and Tischer, I. **Conformational Analysis of Molecular Dynamics Simulations of three representative Proteins**. Quinto Congreso Colombiano de Computación (5CCC), Cartagena, Colombia, Abril 2010. ISBN 978-958-8387-40-6.
-====== Software =====
-  * [2011] Garreta, L. and Tischer, I. **Interfaz Gráfica de Usuario para entrenamiento, predicción y visualización de genes**. Registro: 13-29-189. Agosto, 2011. Dirección Nacional Derechos del Autor. Colombia.
-  * [2011] Garreta, L. and Tischer, I. **Uso de fuentes externas bioinformaticas para retroalimentar la etapa de prediccion de un buscador de genes**. Registro: 13-29-406. Mayo, 2011. Dirección Nacional Derechos del Autor. Colombia.
 ====== Technical Skills ======
-  * **Programming:** Python, Fortran, R, Java, C/C++, R, UNIX shell scripting
+  * ** Architect HPC Solutions **
+  * ** GNU/Linux Admin Scientific Cluster **
+  * **Programming:** Python, Perl, C/C++, R, UNIX shell scripting
-  * **Operating Systems:** UNIX (GNU/Linux, Solaris)
+  * **Operating Systems:** UNIX (GNU/Linux, OSX), Microsoft Windows

Bioinformatics Research Group at Universidad del Valle

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